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Every file was committed with mode 100644. Git on Linux and macOS ignores a hook without the executable bit ("The '.githooks/pre-commit' hook was ignored because it's not set as executable"), so the content check that CONTRIBUTING.md turns on with core.hooksPath never ran before a commit there. tools/fetch_refs.sh, which AGENTS.md runs as a command, stopped with "Permission denied". Windows does not look at the bit, so nothing changes there.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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